Skip to main content

π“†ž Germplasm Storage and Cryopreservation - In vitro strategies, short, medium and long term (cryopreservation)

Germplasm Storage and Cryopreservation - In vitro strategies, short, medium and long term (cryopreservation)

❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ 


1. Introduction

Germplasm refers to the total genetic resources of plants, including seeds, pollen, embryos, tissues, organs, and cells capable of regeneration.

Conservation of germplasm is essential for:

Preservation of genetic diversity

Crop improvement and breeding programs

Conservation of endangered and elite genotypes

Protection against biotic and abiotic stresses

In-vitro germplasm storage offers a reliable
 alternative to field gene banks, especially for vegetatively propagated, sterile, or recalcitrant seed–producing plants.


2. Need for In-vitro Germplasm Storage

Loss of genetic resources due to climate change, pests, diseases

High maintenance cost and risk in field gene banks

Somatic mutations and contamination risks

Requirement for pathogen-free elite planting material

Conservation of species with recalcitrant or no seeds

3. In-vitro Germplasm Conservation Strategies


In-vitro conservation involves maintaining plant material under aseptic conditions with reduced growth or metabolic activity.

Classification based on duration : 

Short-term storage
Medium-term storage
Long-term storage (Cryopreservation)


4. Short-Term In-vitro Germplasm Storage

Duration:  Few weeks to 3–6 months

Stored material  


Shoot cultures
Callus
Cell suspensions
Protoplasts

Strategies  


Regular subculturing
Transfer to fresh medium at fixed intervals
Standard growth conditions
Normal MS medium
25 ± 2°C
16 h photoperiod


Advantages  

Simple and rapid
Suitable for active research and multiplication

Limitations

Labor-intensive
Risk of contamination
Increased chance of somaclonal variation
High maintenance cost

5. Medium-Term In-vitro Germplasm Storage (Slow-Growth Storage)

Duration : 6 months to 2–5 years

Principle
Reduction of plant growth and metabolic activity without affecting viability or genetic stability.

Methods of Slow-Growth Storage

1. Low Temperature Storage

Temperature: 4–15°C
Reduces respiration and cell division
Widely used for potato, banana, cassava

2. Osmotic Growth Retardation

Addition of osmotic agents:
Mannitol
Sorbitol
High sucrose concentration
Reduces water availability

3. Growth Retardants

Abscisic acid (ABA)
Paclobutrazol
CCC (Chlormequat chloride)

4. Reduced Nutrient Concentration

Diluted MS medium (½ or ¼ strength)
Reduced nitrogen and phosphate levels

5. Reduced Light Intensity
Low light or dark conditions

Advantages

Less frequent subculturing
Reduced cost and labor
Maintains clonal fidelity

Limitations

Not suitable for very long-term storage
Genotype-specific response
Risk of physiological disorders


6. Long-Term Germplasm Storage – Cryopreservation

Definition
Cryopreservation is the storage of viable plant material at ultra-low temperatures (–196°C) in liquid nitrogen (LN), where all metabolic activities are completely arrested.


Plant Materials Used
Shoot tips / apical meristems
Somatic embryos
Zygotic embryos
Pollen
Seeds
Cell suspensions
Protoplasts

7. Principles of Cryopreservation

Avoidance of ice crystal formation
Cellular dehydration
Vitrification (glass formation)
Use of cryoprotectants


8. Cryoprotectants


Protect cells from freezing injury.
Penetrating cryoprotectants
DMSO
Glycerol
Ethylene glycol
Non-penetrating cryoprotectants
Sucrose
Mannitol
Sorbitol
PEG
9. Methods of Cryopreservation

1. Slow Freezing Method

Gradual cooling (0.5–1°C/min)
Storage in LN
Suitable for cell suspensions

2. Rapid Freezing

Direct immersion into LN
Used for pollen and seeds

3. Vitrification

Use of highly concentrated cryoprotectant solutions (e.g., PVS2)
Avoids ice formation
Widely used for shoot tips

4. Encapsulation–Dehydration

Explants encapsulated in alginate beads
Partial dehydration
Direct freezing in LN

5. Encapsulation–Vitrification

Combination of encapsulation and vitrification
High survival rate

6. Droplet Vitrification

Explants placed in droplets on aluminum foil
Ultra-rapid cooling
High recovery efficiency

10. Thawing and Recovery

Rapid thawing at 35–40°C
Removal of cryoprotectants
Culture on recovery medium with growth regulators
Gradual acclimatization


11. Advantages of Cryopreservation

Long-term (theoretical indefinite) storage
Genetic stability maintained
Minimal space requirement
Protection from contamination and mutations
Ideal for endangered species

12. Limitations of Cryopreservation

High initial cost
Requires technical expertise
Species- and tissue-specific protocols
Post-thaw regeneration problems

13. Applications
Conservation of endangered plant species
Maintenance of elite germplasm
Backup for field and in-vitro collections
Preservation of transgenic lines
Support to plant breeding programs

14. Conclusion
In-vitro germplasm storage and cryopreservation are powerful tools for plant genetic resource conservation. Short- and medium-term storage ensures safe maintenance of actively used germplasm, while cryopreservation provides a secure, cost-effective, and genetically stable solution for long-term conservation, making it indispensable in modern plant biotechnology.




Germplasm Storage & Cryopreservation – 50 MCQ


1. Germplasm refers to
A. Plant nutrients
B. Genetic material of plants
C. Plant hormones
D. Culture medium
✔ Answer: B

2. The main objective of germplasm conservation is
A. Increase yield
B. Preserve genetic diversity
C. Produce hybrids
D. Eliminate mutations
✔ Answer: B

3. In-vitro germplasm storage is especially useful for
A. Seed propagated crops
B. Recalcitrant seed species
C. Annual crops only
D. Weeds
✔ Answer: B

4. Short-term in-vitro storage usually lasts for
A. 1–2 weeks
B. 3–6 months
C. 5–10 years
D. Indefinitely
✔ Answer: B

5. Frequent subculturing is required in
A. Cryopreservation
B. Medium-term storage
C. Short-term storage
D. Seed bank
✔ Answer: C

6. Major drawback of short-term in-vitro storage is
A. High genetic stability
B. Risk of contamination
C. No regeneration
D. Low cost
✔ Answer: B

7. Medium-term storage is also known as
A. Fast growth storage
B. Active storage
C. Slow growth storage
D. Cryogenic storage
✔ Answer: C

8. Growth retardation in medium-term storage is achieved by
A. Increasing temperature
B. Increasing nutrients
C. Reducing metabolic activity
D. Adding fertilizers
✔ Answer: C

9. Temperature commonly used for slow growth storage is
A. 25–30°C
B. 37°C
C. 4–15°C
D. –196°C
✔ Answer: C

10. Osmotic agents used in slow growth storage include
A. Auxins
B. Cytokinins
C. Mannitol and sorbitol
D. Vitamins
✔ Answer: C

11. Abscisic acid (ABA) is used in
A. Rapid growth
B. Slow growth storage
C. Cryopreservation only
D. Seed germination
✔ Answer: B

12. Reduced nutrient concentration in medium-term storage helps in
A. Enhancing photosynthesis
B. Delaying senescence
C. Reducing growth rate
D. Increasing mutations
✔ Answer: C

13. Long-term storage of germplasm is achieved by
A. Subculturing
B. Cold storage
C. Cryopreservation
D. Field gene banks
✔ Answer: C

14. Cryopreservation temperature is
A. 0°C
B. –20°C
C. –80°C
D. –196°C
✔ Answer: D

15. Liquid nitrogen is used in cryopreservation because
A. It is cheap
B. It stops metabolic activity
C. It promotes growth
D. It is sterile
✔ Answer: B

16. Major problem during freezing of cells is
A. Desiccation
B. Ice crystal formation
C. Cell elongation
D. Photosynthesis
✔ Answer: B

17. Cryoprotectants are used to
A. Kill cells
B. Increase temperature
C. Prevent freezing injury
D. Promote mutations

✔ Answer: C

18. A penetrating cryoprotectant is
A. Sucrose
B. Mannitol
C. DMSO
D. PEG
✔ Answer: C

19. Non-penetrating cryoprotectant is
A. Ethylene glycol
B. Glycerol
C. DMSO
D. Sucrose
✔ Answer: D

20. Vitrification refers to
A. Ice formation
B. Glassy state without ice
C. Cell division
D. Cell death
✔ Answer: B

21. PVS2 is used in
A. Slow freezing
B. Rapid thawing
C. Vitrification
D. Seed germination
✔ Answer: C

22. Encapsulation–dehydration involves
A. Free cells
B. Alginate bead formation
C. Pollen storage
D. Field storage
✔ Answer: B

23. Droplet vitrification is characterized by
A. Slow cooling
B. Use of aluminum foil
C. High temperature storage
D. No cryoprotectant
✔ Answer: B

24. Rapid thawing is preferred because
A. It promotes ice formation
B. It reduces ice recrystallization
C. It kills cells
D. It delays recovery
✔ Answer: B

25. Suitable explant for cryopreservation is
A. Mature leaves
B. Root hairs
C. Shoot tips
D. Senescent tissues
✔ Answer: C


26. Metabolic activities during cryostorage are
A. Increased
B. Reduced
C. Completely arrested
D. Variable
✔ Answer: C

27. Major advantage of cryopreservation is
A. High mutation rate
B. Unlimited storage period
C. Frequent subculturing
D. High contamination risk
✔ Answer: B

28. Cryopreservation helps in conserving
A. Only seeds
B. Only pollen
C. Vegetatively propagated crops
D. Only annual crops
✔ Answer: C

29. Genetic stability during cryopreservation is
A. Poor
B. Moderate
C. High
D. Unpredictable
✔ Answer: C

30. Field gene banks are NOT suitable for
A. Seed crops
B. Vegetative crops
C. Long-term storage
D. Short-term trials
✔ Answer: C

31. Somaclonal variation is more common in
A. Cryopreservation
B. Short-term storage
C. Seed banks
D. Pollen storage
✔ Answer: B

32. Cryopreservation is most useful for
A. Rapid multiplication
B. Germplasm backup
C. Acclimatization
D. Callus induction
✔ Answer: B

33. One limitation of cryopreservation is
A. Low survival rate always
B. Need for skilled personnel
C. Genetic instability
D. Large space requirement
✔ Answer: B


34. Cryopreserved materials are usually stored in
A. Freezers
B. Refrigerators
C. Liquid nitrogen tanks
D. Incubators
✔ Answer: C

35. Which plant part is commonly cryopreserved?
A. Old leaves
B. Flowers
C. Apical meristems
D. Bark
✔ Answer: C

36. Medium-term storage reduces subculturing frequency by
A. Increasing nutrients
B. Slowing growth
C. Increasing light
D. Raising temperature
✔ Answer: B 

37. PEG used in 
cryopreservation acts as
A. Hormone
B. Nutrient
C. Cryoprotectant
D. Antibiotic
✔ Answer: C

38. Which method avoids ice crystal formation completely?
A. Slow freezing
B. Rapid freezing
C. Vitrification
D. Cold storage
✔ Answer: C

39. Thawing temperature is usually
A. 0–5°C
B. 10–15°C
C. 35–40°C
D. 60°C
✔ Answer: C

40. Recovery of cryopreserved explants requires
A. No culture medium
B. Special recovery medium
C. Field planting directly
D. Dark storage only
✔ Answer: B

41. Cryopreservation is considered safe because
A. No chemicals are used
B. Cells do not divide
C. DNA replication continues
D. Growth is promoted
✔ Answer: B

42. Encapsulation–vitrification is a combination of
A. Seed storage and freezing
B. Alginate beads and vitrification
C. Cold storage and drying
D. Field storage and LN
✔ Answer: B

43. Long-term germplasm storage ensures
A. Rapid multiplication
B. Continuous growth
C. Conservation for future use
D. Immediate planting
✔ Answer: C

44. Cryopreservation is NOT useful for
A. Endangered species
B. Elite clones
C. Genetic erosion prevention
D. Rapid field multiplication
✔ Answer: D

45. In slow growth storage, light intensity is
A. Increased
B. Normal
C. Reduced
D. Eliminated completely always
✔ Answer: C

46. Which crop is commonly conserved by in-vitro slow growth?
A. Wheat
B. Rice
C. Potato
D. Maize
✔ Answer: C
47. The key requirement for cryopreservation success is
A. High temperature
B. Ice formation
C. Proper dehydration
D. Continuous growth
✔ Answer: C

48. Cryopreservation is also called
A. Cold storage
B. Ultra-low temperature storage
C. Dry storage
D. Field storage
✔ Answer: B

49. Pollen can be preserved effectively by
A. Field storage
B. Subculturing
C. Cryopreservation
D. Callus culture
✔ Answer: C

50. Germplasm conservation ultimately supports
A. Genetic erosion
B. Sustainable agriculture
C. Monoculture
D. Habitat destruction
✔ Answer: B


❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥

<script async src="https://pagead2.googlesyndication.com/pagead/js/adsbygoogle.js?client=ca-pub-5621422462502863"
     crossorigin="anonymous"></script>
<ins class="adsbygoogle"
     style="display:block"
     data-ad-format="autorelaxed"
     data-ad-client="ca-pub-5621422462502863"
     data-ad-slot="2539662024"></ins>
<script>
     (adsbygoogle = window.adsbygoogle || []).push({});
</script>

Comments

Popular Posts

❃HPLC – High Performance Liquid Chromatography

HPLC – High Performance Liquid Chromatography ┏━━━━━ •❃°•°❀°•°❃•━━━━•━━━┓  1. Introduction High Performance Liquid Chromatography (HPLC) is an advanced analytical technique used for the separation, identification, and quantification of components present in a mixture. It is based on the differential distribution of analytes between a stationary phase and a liquid mobile phase under high pressure. HPLC is widely used in biochemistry, biotechnology, pharmaceuticals, food analysis, environmental studies, and clinical diagnostics. 2. Principle of HPLC The principle of HPLC is based on partition, adsorption, ion-exchange, or size-exclusion mechanisms, depending on the type of column used. A liquid mobile phase is pumped at high pressure through a column packed with fine stationary phase particles Sample components interact differently with the stationary phase Components with stronger interaction elute slower Components with weaker interaction elute faster Separated components are detec...

Microbial Production of PharmaceuticalsSomatostatin, Humulin and Interferons

Microbial Production of Pharmaceuticals Somatostatin, Humulin and Interferons 1. Introduction Advances in recombinant DNA technology have enabled microorganisms to produce human therapeutic proteins safely, economically and in large quantities. Microbial systems such as Escherichia coli and yeast (Saccharomyces cerevisiae) are widely used for the production of pharmaceuticals that were earlier isolated from human or animal tissues. Important microbial-derived pharmaceuticals include somatostatin, human insulin (Humulin) and interferons. 2. Advantages of Microbial Production of Pharmaceuticals High yield and rapid production Cost-effective and scalable Free from animal pathogens Consistent product quality Easy genetic manipulation 3. General Steps in Microbial Production of Recombinant Pharmaceuticals Isolation of target gene Construction of recombinant DNA Insertion into suitable vector Transformation into host microorganism Expression of protein Downstream processing and purification ...

••CLASSIFICATION OF ALGAE - FRITSCH

      MODULE -1       PHYCOLOGY  CLASSIFICATION OF ALGAE - FRITSCH  ❖F.E. Fritsch (1935, 1945) in his book“The Structure and  Reproduction of the Algae”proposed a system of classification of  algae. He treated algae giving rank of division and divided it into 11  classes. His classification of algae is mainly based upon characters of  pigments, flagella and reserve food material.     Classification of Fritsch was based on the following criteria o Pigmentation. o Types of flagella  o Assimilatory products  o Thallus structure  o Method of reproduction          Fritsch divided algae into the following 11 classes  1. Chlorophyceae  2. Xanthophyceae  3. Chrysophyceae  4. Bacillariophyceae  5. Cryptophyceae  6. Dinophyceae  7. Chloromonadineae  8. Euglenineae    9. Phaeophyceae  10. Rhodophyceae  11. Myxophyce...

SCAR (Sequence Characterized Amplified Region) Markers

SCAR (Sequence Characterized Amplified Region) Markers   Introduction SCAR markers are PCR-based DNA markers derived from RAPD, AFLP, or other random markers. Developed by Paran and Michelmore in 1993 to convert dominant, less reproducible markers into specific, reproducible, co-dominant markers. SCAR markers are locus-specific, reproducible, and sequence-characterized, making them ideal for marker-assisted selection (MAS). Principle SCAR markers are designed based on known DNA sequences obtained from cloned RAPD/AFLP fragments. Specific primers (18–24 bp) are synthesized to amplify a single, defined locus. The PCR amplification of this region generates a distinct band, which is highly reproducible and can distinguish homozygotes from heterozygotes if designed as co-dominant. Key idea: Random marker (e.g., RAPD) → Cloning & sequencing → Design specific primers → PCR → SCAR marker Materials Required Genomic DNA from the organism Specific primers (18–24 bp) designed from sequence...

Intellectual Property Rights (IPR) – Detailed Notes

Intellectual Property Rights (IPR) – Detailed Notes 1. Introduction Intellectual Property Rights (IPR) are legal rights granted to creators and inventors over their creations or inventions. They protect innovation and creativity, providing the owner exclusive rights to use, sell, or license their creation. IPR encourages research, development, and economic growth by rewarding creativity. 2. Importance of IPR Protects inventions, designs, and creative work. Prevents unauthorized use, copying, or commercialization. Encourages innovation and research. Provides financial benefits to inventors through licensing or royalties. Supports economic growth and competitiveness. Safeguards traditional knowledge and biodiversity. 3. Types of Intellectual Property Rights A. Patents Definition: Exclusive right granted to an inventor for a new invention for a limited period (usually 20 years). Requirements: Novelty – must be new and not published. Inventive step – non-obvious to someone skilled in the f...

Single Nucleotide Polymorphisms (SNPs) – Detailed Notes

Single Nucleotide Polymorphisms (SNPs) – Detailed Notes 1. Definition SNPs are single base-pair variations in the DNA sequence that occur at a specific position in the genome among individuals of a species. Example: At a specific locus, one individual may have A while another has G: Copy code Individual 1: …A T C G A T…   Individual 2: …A T C G G T… SNPs are the most common type of genetic variation in most organisms. 2. Characteristics of SNPs Single base change: Involves substitution of one nucleotide for another (A↔G, C↔T). Biallelic nature: Most SNPs have only two alleles in a population. Widespread in the genome: Found in coding regions (exons), non-coding regions (introns, promoters, intergenic regions). Stable inheritance: Passed from generation to generation like other genetic markers. Frequency: Occur approximately every 100–300 bp in the human genome. 3 . Types of SNPs SNPs are categorized based on location or effect on gene function: A. Based on genomic location Cod...

Exploitation of Somaclonal and Gametoclonal Variations for Plant Improvement

Exploitation of Somaclonal and Gametoclonal Variations for Plant Improvement  1. Introduction Plant tissue culture often induces genetic and epigenetic variations among regenerated plants. These variations, when stable and heritable, can be exploited as a source of novel traits for crop improvement. Somaclonal variation: Variation arising in plants regenerated from somatic cells cultured in vitro. Gametoclonal variation: Variation arising in plants regenerated from gametic cells (anther, pollen, ovule culture). Both provide additional genetic variability beyond conventional breeding. 2. Somaclonal Variation 2.1 Definition Somaclonal variation refers to genetic variation observed among plants regenerated from somatic tissue cultures, such as callus, suspension cultures, or explants. Term coined by Larkin and Scowcroft (1981). 2.2 Sources of Somaclonal Variation Chromosomal changes Aneuploidy Polyploidy Chromosome rearrangements Gene mutations Point mutations Insertions and deletions...

❥NORTHERN BLOTTING

NORTHERN BLOTTING – 30 MARK DETAILED NOTES  π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž❥ π“†ž ❥ π“†ž❥ π“†ž❥  Northern blotting is a molecular biology technique used to detect specific RNA molecules in a complex mixture. It provides information about gene expression, RNA size, and transcript abundance by hybridizing RNA with a labeled complementary DNA or RNA probe. πŸ“Œ Named by analogy to Southern blotting (DNA detection). 2. Principle The principle of Northern blotting is based on: Separation of RNA molecules by size using denaturing agarose gel electrophoresis Transfer (blotting) of separated RNA onto a nylon or nitrocellulose membrane Hybridization of membrane-bound RNA with a labeled complementary probe Detection of RNA–probe hybrids by autoradiography or chemiluminescence ✔ Only RNA sequences complementary to the probe will be detected. 3. Types of RNA Analyzed mRNA (most common) rRNA tRNA miRNA and siRNA (with modified protocols) 4. Requirements / Materials Total RNA or poly(A)+ RNA Denaturing agarose ...

𓆉 INDEX PAGE -NOTETHEPOINT43

INDEX PAGE   MAIN    CONTENT 1.   HSST BOTANY SYLLABUS, DETAILED NOTES, MCQ 2.  SET GENERAL PAPER SYLLABUS, DETAILED NOTES, 50MCQ 3.  SET BOTANY SYLLABUS, DETAILED NOTES, MCQ 4. MSC BOTANY THIRD SEMESTER SYLLABUS, NOTES (KERALA UNIVERSITY ) 5. MSC BOTANY THIRD SEMESTER QUESTION PAPER (KERALA UNIVERSITY ) 6. MSC BOTANY FOURTH SEMESTER SYLLABUS &NOTES (KERALA UNIVERSITY ) 7. FOURTH SEMESTER MSC BOTANY PREVIOUS QUESTION PAPER  (KERALA UNIVERSITY )

Fourth Semester M.Sc. Degree Examination, September 2019BotanySpecial Paper II - ElectiveBO 242 a: BIOTECHNOLOGY(2013 Admission onwards)

Reg. No.......  Name......... G-5263 Fourth Semester M.Sc. Degree Examination, September 2019 Botany Special Paper II - Elective BO 242 a: BIOTECHNOLOGY (2013 Admission onwards) Max. Marks: 75 1. Answer the following questions: 1. Humulin 2. YAC 3. Cybrids 4. Hybridomas 5. IPR 6. Gene therapy 7. C DNA library 8. AFLP 9. Hairy root culture 10. Somacional variation (10 x 1=10 Marks) II. Answer the following questions in not more than 50 words : 11. (a) What are immobilized enzymes? What is its advantage? OR (b) Write a short note on molecular farming. 12. (a) Give an account of bioprocess technology for the production of secondary metabolites. OR (b) What are bioreactors? How it operates? 13. (a) What are probiotics?. How do they work? OR (b) Discuss the methodology and application of western blotting. 14. (a) Briefly explain the application of protoplast culture OR (b) Write a short note on gene therapy 15. (a) What are reporter genes? Discuss its utility in transformation studies O...